BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H03SP1|AL427679
(944 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1069 1637 0.0
>3x_Contig1069
Length = 3994
Score = 1637 bits (821), Expect = 0.0
Identities = 857/873 (98%), Gaps = 1/873 (0%)
Strand = Plus / Plus
Query: 69 cttcatgtatccctttaatgatatgctcactggagcctttttctctctagattctttcac 128
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttcatgtttccctttaatgatatgctcactggagcctttttctctctagattctttcac 60
Query: 129 ccaatagtactctgacccattattactaacaatttcaaacccattaattaaagcatccac 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccaatagtactctgacccattattactaacaatttcaaacccattaattaaagcatccac 120
Query: 189 tttcaaagtatcacttaatccatatagtctacctgaaggtttcaacgtcttgtgaagcac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcaaagtatcacttaatccatatagtctacctgaaggtttcaacgtcttgtgaagcac 180
Query: 249 aggtattagttttggtggaaactgaatggcttctggcttttcaggagtcacatagtatat 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggtattagttttggtggaaactgaatggcttctggcttttcaggagtcacatagtatat 240
Query: 309 tacatcgtacttctcatcatctggagaaatagtaccatcatttagtttgttaatcaaata 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tacatcgtacttctcatcatctggagaaatagtaccatcatttagtttgttaatcaaata 300
Query: 369 ctgagcaactatagtagtctcagacaagattgaacccttctcaatagtttccaatagctc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgagcaactatagtagtctcagacaagattgaacccttctcaatagtttccaatagctc 360
Query: 429 cggctgttgcgttacagcwggatggatcaaaaccaacgagtctctactcacagtcatact 488
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggctgttgcgttacagctggatggatcaaaaccaacgagtctctactcacagtcatact 420
Query: 489 ttctttgaccttcttttatctctgcttccagttagtataaggggaaawgagcaacagtga 548
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 421 ttctttgaccttcttttatctctgcttccagttagtataaggggaaatgagcaacagtga 480
Query: 549 acagctcaataawaaaccggtaawaaacagaactgtgaaawaagactaagtagtgtattc 608
|||||||||||| ||||||||| |||||| ||||||||| |||||||||||||||||||
Sbjct: 481 acagctcaataataaaccggtattaaacagtactgtgaaataagactaagtagtgtattc 540
Query: 609 ycttgawattagtacagcacccataaaaagaaaatcttaacttgtccagctgtccgctct 668
||||| |||||| ||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 541 tcttgatattagttcagcacccatataaagaaaatcttaacttgtcctgctgtccgctct 600
Query: 669 ttatcatgaacataagaaaacagttactcatctttccaacttcttactcatagaaagatg 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttatcatgaacataagaaaacagttactcatctttccaacttcttactcatagaaagatg 660
Query: 729 attaagtgcttccaaatatattccagatgtcaagcttcggatttcctgagtaatcaagag 788
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 attaagttcttccaaatatattccagatgtcaagcttcggatttcctgagtaatcaagag 720
Query: 789 aaaaaaaaaaaaaagaaagtatatcatggcacgtgacttacgggccaaaagttagattag 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaaaaaaaaaaaaagaaagtatatcatggcacgtgacttacgggccaaaagttagattag 780
Query: 849 taagacaactgctgggttgccggaaccggttaatacgatggacggtaccggaa-gacctg 907
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 781 taagacaactgctgggttgccggaaccggttaatacgatggacggtaccggaaggacctg 840
Query: 908 tatktctggtattagaatgttacaatggggtga 940
||| |||||||||||||||||||||||||||||
Sbjct: 841 tatgtctggtattagaatgttacaatggggtga 873
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,389
Number of Sequences: 1807
Number of extensions: 15389
Number of successful extensions: 440
Number of sequences better than 1.0e-20: 1
length of query: 944
length of database: 10,358,551
effective HSP length: 16
effective length of query: 928
effective length of database: 10,329,639
effective search space: 9585904992
effective search space used: 9585904992
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)